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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842915.1_cds_XP_016508540.1_21553
CDS Infomation

[gene=LOC107826106] [db_xref=GeneID:107826106] [protein=choline monooxygenase, chloroplastic-like] [protein_id=XP_016508540.1] [location=complement(join(198330..198467,198594..198644,199690..199783,199876..199997,200127..200222,200308..200523,200622..200696,201719..201854,202030..202075,203467..203803))] [gbkey=CDS]
Sequence

ATGGCAGTGCTACAGAAGCTCAGTTCCTTTAATCACTTCCCCAGACAACAATCTCAGTTC
AAGAAACCCAAATTATGTTGTCCTTTACCTTTAAAGATTCAGATTTTCAGTTGTCCTATA
AAACACAGAATCTATCATCCTTCATTTCAAGTCTCATCTTCACTAATTAACACTAATTAC
TCAAACCACCATGATTATGCTCAAAAATTGGTTCAAGAATTTGACCCCAAAATCCCTATT
GAAGAAGCTGTGACTCCACCTAGTTCTTGGTACACAGACCCTTCTTTTTATAATCATGAA
CTCAATCAAGTCTTCTTCAAAGGATGGCAAGCTGTTGGGTACACCGAACAGATCAAAGAG
CCTAGCCAGTATTTCACCGGAAGATTGGGCAATGTCGAGTATGTTGTATGTCGAGATGAT
GGTGGAAAAATACATGCTTTTCATAACGTGTGCCGGCATCACGCCTCTCTTCTTGCCTCG
GGAAGTGGGAAAAGATCTTGCTTTGTTTGCCCATACCATGGGTGGACATACGGATTGGAC
GGAGCGCTTCTTAAGGCAACTAGAATAACTGGAATCAAGAACTTCAAAGTGAACGAGATG
GGACTAGTTCCAATGAAAGTAGCTGTATGGGGACCGTTCATACTTCTCAATTTTGAAAAT
GGAGTTTTGTCTGAACAAGAATCTGATTTTGACTTGGTTGGAAACGAATGGCTGGGTACT
TCATCCCAAATCTTGGTGGATGGTGGTGGAGTCGATTCTTCATTAAGTTTTTTATGTAGA
CGCGAATACACCATTGAGTGTAACTGGAAGGTGTTCTGTGACAACTACTTGGATGGAGGT
TATCATGTACCATATGCTCATAAAGGTCTTGCTTCTGGTCTGACGCTTGACTCGTATTCT
ACCACGATACTTGAGAAAGTCAGCATCCAACGATGTGAAACTGGGAGTGCAGAAAAGGAC
CAAGAATTTGATCGACTTGGATCAAAAGCTTTATATGCATTCGTGTATCCAAACTTCATG
ATCAACAGGTATGGTCCTTGGATGGACACGAATCTAGTACTGCCTCAAGGACCTCGGAAA
TGTCTAGTGATATTTGACTACTTTCTTGATGCATCTCTCAAGGGTGACGAGAGTTTTATC
GCACAGAGTCTCCAAGATAGTGAGACAGTGCAGATAGAGGATATAAAATTATGTGAAGCT
GTACAAAGAGGCCTCGAATCACCTGCGTACAGCTCTGGCCGGTATGCACCACAAGTCGAG
AAGGCTATGCATCATTTTCACTGTCTTCTATATGAAAATCTTTGTAATTGA

Peptide Sequence

PEP ID

XP_016508540.1
PEP Infomation

PREDICTED: choline monooxygenase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAVLQKLSSFNHFPRQQSQFKKPKLCCPLPLKIQIFSCPIKHRIYHPSFQVSSSLINTNY
SNHHDYAQKLVQEFDPKIPIEEAVTPPSSWYTDPSFYNHELNQVFFKGWQAVGYTEQIKE
PSQYFTGRLGNVEYVVCRDDGGKIHAFHNVCRHHASLLASGSGKRSCFVCPYHGWTYGLD
GALLKATRITGIKNFKVNEMGLVPMKVAVWGPFILLNFENGVLSEQESDFDLVGNEWLGT
SSQILVDGGGVDSSLSFLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLTLDSYS
TTILEKVSIQRCETGSAEKDQEFDRLGSKALYAFVYPNFMINRYGPWMDTNLVLPQGPRK
CLVIFDYFLDASLKGDESFIAQSLQDSETVQIEDIKLCEAVQRGLESPAYSSGRYAPQVE
KAMHHFHCLLYENLCN

Transcript Sequence

Gene sequence data has not been registered.